PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_19937-P1
Organism
Triticum urartu
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 295aa    MW: 32759.2 Da    PI: 6.3705
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_19937-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.71.4e-094887544
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44
                     k  rr+++NReAAr+sR+RKk ++++Le    +L +  ++
  TRIUR3_19937-P1 48 KTLRRLAQNREAARKSRLRKKSYVQQLESSKLKLAQLEQE 87
                     7889************************855444444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-644107IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.3354690IPR004827Basic-leucine zipper domain
PfamPF001701.5E-64889IPR004827Basic-leucine zipper domain
CDDcd147084.30E-2148100No hitNo description
SuperFamilySSF579597.5E-74891No hitNo description
Gene3DG3DSA:1.20.5.1701.9E-74993No hitNo description
PROSITE patternPS0003605166IPR004827Basic-leucine zipper domain
PfamPF141442.8E-33130205IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MEMFNLNFMF QPELLESCPL EQGQSGGAIM ASNSSDRSDR SDKPLDQKTL RRLAQNREAA  60
RKSRLRKKSY VQQLESSKLK LAQLEQELQK ARQQGIFISS SGDQTHAMSG NGAMTFDLEY  120
TRWLEDQNKQ INELRTAVNA HASDSDLRLI VDGIMGHYDE IFKVKGVAAK ADVFHILSGM  180
WKTPAERCFL WLGGFRPSEL LKLLVNHLEP LTEQQMLGLT NLQQSSQQAE DALSQGMEAL  240
QQSLAETLAG SLGSSAGSSG NVANYMGQMA MAMGKLGTLE NFLRQAGLFP FIFQS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3639310.0AK363931.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2020D02.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008651323.11e-171PREDICTED: uncharacterized protein LOC100279481 isoform X5
SwissprotQ415581e-145HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLM8B3070.0M8B307_TRIUA; Transcription factor HBP-1b(C1)
STRINGMLOC_13431.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-117bZIP family protein